The EGR fault is probably showing because the EGR valve is stuck, although there's no flow through the system the valve can still get stuck (Especially if the valve isn't cleaned while blanking).
Could be a solenoid issue, IIRC, you can get the solenoid off without removing the EGR itself, you can then check the solenoid itself.
The intake air quantity could be a MAP or MAF sensor, MAF tells it what's going in, MAP tells it what it's actually getting.
Try whipping the MAF out and cleaning it, electrical contact cleaner is good or chuck it in a container with methylated spirits and shake vigorously!
If that doesn't work, try take the MAP out and cleaning that, often the sensor hole gets blocked with gunk.
Davren,
I'd expect a little more help from a moderator, anyone who's blanked an EGR on a JTD knows that you don't get an error. You certainly don't get an error because you blank it.
I know there's an 'official' line on blanking which is fair enough, your post doesn't imply this and is simply flippant.